A Few Genetic Tweaks To Chinese Bird Flu Virus Could Fuel A Human Pandemic

Jun 15, 2017
Originally published on June 15, 2017 7:49 pm

A study published Thursday shows how a bird flu virus that's sickening and killing people in China could mutate to potentially become more contagious.

Just three changes could be enough to do the trick, scientists report in the journal PLOS Pathogens.

And the news comes just as federal officials are getting ready to lift a moratorium on controversial lab experiments that would deliberately create flu viruses with mutations like these.

Public health officials have been worried about this bird flu virus, called H7N9, because it's known to have infected more than 1,500 people — and killed 40 percent of them. So far, unlike other strains that more commonly infect humans, this deadly virus does not spread easily between people.

The fear is that if it mutates in a way that lets it spread more easily, the virus will sweep around the globe and take a heavy toll, because people's immune systems haven't ever been exposed to this type of flu before. Past pandemics caused by novel flu viruses jumping from animals or birds into people have killed millions.

"As scientists we're interested in how the virus works," says Jim Paulson, a biologist at The Scripps Research Institute. "We're trying to just understand the virus so that we can be prepared."

That's why he and his colleagues recently tinkered with a piece of the H7N9 flu — a protein that lets the virus latch onto cells. It's thought to be important for determining which species the virus can infect.

"So it's not the whole virus," says Paulson. "It's just a piece — just a fragment — that we can then study for its properties."

What they studied is how different changes affected the virus' ability to bind to receptors found on the surface of human cells.

It turns out that three small mutations made the fragment bind far more strongly to receptors found on human cells than to receptors from bird cells. Scientists know, from studying strains that led to past pandemics, that this kind of switch appears to be involved in enabling a bird flu virus to become transmissible between people.

"All we've done is to look at one of the properties that we're pretty certain is important," says Paulson, who cautions that additional genetic mutations might be necessary for this virus to become more contagious in humans. "So, just because we've changed the one property doesn't mean that that property alone is sufficient to let the virus transmit."

One way of finding out would be to test the effect of these mutations in the actual H7N9 virus. And he and a colleague did put in a proposal to the National Institutes of Health to modify the virus to explore what changes could make it transmissible among lab animals.

"And then the moratorium came out and so it wasn't reviewed," says Paulson.

That unusual moratorium, announced by the White House in 2014, halted federally funded research that might make flu viruses more dangerous.

It came after more than two years of debate among scientists about whether these experiments are too risky. Critics argue that the information gained isn't worth the possibility that a lab-created mutant flu might escape the lab, either by accident or because someone intentionally used it as a bioweapon. They argue that scientists shouldn't be in the business of taking deadly viruses and making them even worse.

"These are all legitimate concerns, in my view," says Paulson. Because of those concerns, he now wants to test these genetic changes — not in the H7N9 virus itself, but rather in a weakened strain of flu that can move from ferret to ferret, the lab stand-in for people in flu studies.

And it probably won't be long before he can propose such an experiment to the NIH, because the Department of Health and Human Services is almost finished with drafting a new policy that spells out how officials will review this type of flu experiment in the future.

"As soon as that policy is finalized, the moratorium will be lifted and NIH will move forward in concordance with that new policy. Our expectation is it will be very soon," says Carrie Wolinetz, acting chief of staff and associate director for science policy at the NIH. "We want to make sure that there is an appropriate level of review to seriously consider the balance of that benefit/risk equation in a way that allows us move forward responsibly."

One scientist who's been critical of deliberately creating potential pandemic pathogens is David Relman, a biologist at Stanford. If a scientist wanted to test the effect of these recently-identified mutations in a weakened lab strain of flu, he says, "I would be much more accepting of that kind of experiment."

But if researchers wanted to make these genetic changes in the actual H7N9 virus, he says, "I would be very hesitant, were they to want to do that. In fact, I would be reluctant to have them do that."

Relman notes that a policy guidance released in the last days of the Obama administration says work that could create a highly virulent, highly transmissible virus requires special scrutiny. "Now, the part I don't agree with," he says, "is they don't come right out and say, 'Let's not do that."

Other researchers, like Ron Fouchier of Erasmus Medical Center in the Netherlands, who receives NIH funding, have publicly argued for the need to modify H7N9 in the lab to see exactly what this virus might be capable of. They believe such research is essential to truly understand the threat.

"The rest of the world is moving forward with this type of experiment already," says Fouchier, whose genetic experiments with a different bird flu virus sparked a public outcry in 2011.

"And so the U. S. can either join or not join. It's up to them, but the work will continue," he says.

"I'm pretty sure that the U. S. government will start funding this research again," Fouchier says, "because this is clearly important work. In the flu field, this is one of the most important questions to be addressed: How do we identify, among thousands of viruses that cause outbreaks, those viruses that are going to cause the next pandemic?"

He's hoping to learn more about how officials will handle all this when a network of federally funded flu researchers meets next month in Atlanta.

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AUDIE CORNISH, HOST:

Public health officials are increasingly worried about a strain of bird flu virus that's circulating in China. In the last nine months it's sickened more than 700 people, and about 40 percent of them died. Now a team of researchers from the U.S. and the Netherlands has new information on what might cause this virus to start spreading more widely. NPR's Nell Greenfieldboyce reports.

NELL GREENFIELDBOYCE, BYLINE: Right now people seem to get the H7N9 bird flu virus from, well, birds. It isn't capable of spreading from person to person to person to person. But what if that changed?

JAMES PAULSON: We're trying to just understand the virus so that we can be prepared.

GREENFIELDBOYCE: Jim Paulson is a biologist at the Scripps Research Institute. He and some colleagues recently tinkered with a piece of this bird flu, a protein that lets the virus latch on to cells.

PAULSON: So it's not the whole virus. It's just a fragment that we can then study for its properties.

GREENFIELDBOYCE: They found that it only takes three little changes to make this protein capable of hooking on to human cells. That could help the virus start spreading between people, although Paulson cautions that other changes might be necessary.

PAULSON: There may be several other genes that are important for transmission that we don't know about.

GREENFIELDBOYCE: Now, one way of finding out would be to make those three changes in the actual virus in a highly secure lab and see what happens. Does it become contagious in lab animals? Well, scientists like Paulson can't do that experiment because in 2014 the Obama administration stopped all federally funded work that might make flu viruses more dangerous. That's because critics argued that scientists shouldn't be in the business of deliberately making deadly flu viruses even worse. What if a lab-made virus escaped or got stolen for use as a bioweapon?

PAULSON: I admit that - you know, that some people have real reservations about it. I mean, these are all legitimate concerns, in my view.

GREENFIELDBOYCE: That's why Paulson wants to test these mutations not in the deadly H7N9 bird flu virus itself but rather in a weakened flu virus. And that may soon be possible. Government officials are drafting a new system for how they'll review flu experiments to decide what can go forward. Carrie Wolinetz is associate director for science policy at the National Institutes of Health, which funds flu research. She says once that policy is finished the moratorium will be lifted.

CARRIE WOLINETZ: Our expectation is it will be very soon.

GREENFIELDBOYCE: It's not clear what exactly will be permitted under the new policy. And after years of debate, it seems like scientists still have reached no consensus on how to balance the risks and the benefits. David Relman is a biologist at Stanford University. He'd be OK with putting these mutations in a weakened virus, but putting them in the H7N9 virus...

DAVID RELMAN: I would be very hesitant to see them do that experiment and try it out.

GREENFIELDBOYCE: Other scientists say we have to experiment with H7N9. Ron Fouchier is a virologist at Erasmus Medical Center in the Netherlands who studies flu with U.S. funding. He says at the end of the day you need to alter the real flu virus you're worried about to know what it's really capable of. He thinks U.S. officials will agree. But even if they don't...

RON FOUCHIER: The rest of the world is moving forward with this type of experiment already. And so the U.S. can either join or not join. It's up to them. But the work will continue.

GREENFIELDBOYCE: He hopes that officials will reveal more about their plans when federally funded flu researchers meet next month in Atlanta. Nell Greenfieldboyce, NPR News.

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